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دراسة الفعالية البيولوجية لمستخلص الشاترك == Biological Study on the Activity of Fumaria officinalis Extracts

Author name: مهند حسن حسين العزاوي
Supervisor name: Khulood W. Al-Samarraei | Alice K. Melconian
General topic: Biology
Specific topic: Biotechnologies
Degree: Master
Language: English
University location: Baghdad
First pages:

دراسة بعض التغيرات الكروموسومية الناتجة عن التلوث بالاوكراتوكسين A في الفئران == Study of Some Chromosomal Variations Caused by Ochratoxin A Contamination in mice

Author name: نور الحكم حسن علي التكريتي
General topic: Biology
Specific topic: Biotechnologies
Degree: Master
Language: English
University location: Baghdad
First pages:

تاثير بكتريا حامض اللاكتيك على المسببات البكتيرية لمرض حب الشباب الالتهابي الشديد == The Effect of Lactic Acid Bacteria on Bacterial Causes of Severe Acne Vulgaris

Author name: رنا قاسم نعيم الدليمي
Supervisor name: Abdul W. Baqir | Hussain M. Ghazi
General topic: Biology
Specific topic: Biotechnologies
Degree: Master
Language: English
University location: Baghdad
First pages:

دراسة الفعالية البايولوجية خارج الخلية لمستخلص Pleurotus oyster == In vitro Study of Biological Activity of Pleurotus oyster Extract

Author name: علياء سعد عبد كركوش
General topic: Biology
Specific topic: Biotechnologies
Degree: Master
Language: English
University location: Baghdad
First pages:

تاثير Probiotic على عوامل الحركة وظاهرة الانثيال لبكتريا Proteus mirabilis == Effect of Probiotic on Motility Factors and Swarming Phenomenon of Proteus mirabilis

Author name: ريم وليد يونس زين العابدين
General topic: Biology
Specific topic: Biotechnologies
Degree: Master
Language: English
University location: Baghdad
First pages:

تاثير Probiotic على بكتريا Proteus mirabilis وصفتها الالتصاقية

Author name: غيداء حسين عبد الرحيم الجبوري
Supervisor name: Abdul W. Baqir
General topic: Biology
Specific topic: Biotechnologies
Degree: Master
Language: English
University location: Baghdad
First pages:

استخلاص و تنقية الالجنيت من عزلات بكتريا Pseudomonas aeruginosa ودراسة دوره في الامراضية == Extraction and purification of alginate from Pseudomonas aeruginosa isolates and study its role in pathogenesis

Author name: لؤلؤه سعد زكي
Supervisor name: رشید محجوب المصلح
General topic: Biology
Specific topic: Microbiology
Degree: Master
University: University of Baghdad
Language: English
University location: Baghdad
First pages:

تاثير البروتين الرابط للGlucan (Glucan Binding Protein) في تكوين الغشاء الحيوي لبكتريا Streptococcus mutans وتعيين المثبطات الكيميائية له

Author name: شيماء فؤاد رشيد الخزرجي
Supervisor name: مي طالب فليح
General topic: Biology
Specific topic: Microbiology
Degree: Master
University: University of Baghdad
Language: English
University location: Baghdad
First pages:

تاثير مستخلصات نبات عين البزون Catharanthus roseus في البكتريا المرضية المعزولة من الالتهابات الجلدية داخل وخارج الجسم الحي == In vitro and in vivo effect of Catharanthus roseus plant extracts on pathogenic bacteria isolated from skin infections

Author name: عهود عبد الستارعبد الجبار المخزومي
Supervisor name: عبد اللطيف محمد جواد | هند حسين عبيد
General topic: Biology
Specific topic: Microbiology
Degree: Master
University: University of Baghdad
Language: English
University location: Baghdad
First pages:

دراسة التنميط الجيني وبعض عوامل الضراوة لبكتيريا Pseudomonas aeruginos == Study of Genotyping and Some Virulence Factors of Pseudomonas aeruginosa

Author name: عباس فالح مهدي الارناؤوطي
Supervisor name: رنا مجاهد عبد الله الشيخ
General topic: Biology
Specific topic: Microbiology
Degree: Master
University: University of Baghdad
Language: English
University location: Baghdad
First pages:

التمييز بين الذكور والاناث لنبات الهوهوبا خارج وداخل الجسم الحي باستخدام تقنية ال PCR == Molecular Differentiations of simmondsia chinensis

Author name: جميل ربيع جميل العبيدي
General topic: Biology
Specific topic: Biotechnologies
Degree: Master
Language: English
University location: Baghdad
First pages:

دراسة دينامية الجماعة السكانية لمتشابهة الاقدام الارضية porcellio scaber Isopoda : porcellionidae Latrellile 1980 في منطقة الجادرية \ بغداد \ العراق

Author name: سعاد مجيد حسن حسين الطائي
General topic: Biology
Specific topic: Life Science
Degree: Master
University: University of Baghdad
Language: English
University location: Baghdad
First pages:

تاثير موعد الزراعة والفسفور الكاينتين في بعض صفات النمو والمركبات الفعالة لنبات الحلبة

Author name: رسل طه علي البلداوي
General topic: Biology
Specific topic: Plant - Medicinal Plants
Degree: Master
Language: Arabic
University location: Baghdad
First pages:

تقييم اضطرابات الدهون ومقاومة الانسولين مع بعض الحركيات الدهنية في الذكور المصابين بداء السكري النوع الثاني

Author name: نجلاء جبار وسمي
Supervisor name: علي شلش سلطان
General topic: Biology
Specific topic: Zoology
Degree: Master
Language: Arabic
University location: Baghdad
First pages:

تقييم مخاطر بعض المواد الكيميائية في مستحضرات تجميل الوجه المستعملة والجديدة في مدينة بغداد/ العراق == Risk assessment of some chemicals in new and used facial cosmetics in Baghdad city/ Iraq

Author name: همسة طارق عبد الرزاق الحلفي
Supervisor name: محمد نافع علي العزاوي
General topic: Biology
Specific topic: Environment
Degree: Doctorate
University: University of Baghdad
Language: English
University location: Baghdad
First pages:

دراسة بعض الصفات الفيزيائية والكيميائية والتلوث البكتيري لمحطات مياه الشرب في مدينة بغداد العراق == Study of Some Physical and Chemical Properties and Bacterial Pollution in the Drinking Water Treatment Plants in Baghdad City - Iraq

Author name: انسام رحيم محمود
Supervisor name: فكرت مجيد حسن
General topic: Biology
Degree: Master
University: University of Baghdad
Language: English
University location: Baghdad
First pages:

المجموعة الحيوانية المتطفلة في بعض انواع اسماك نهر ديالى في محافظة ديالى, العراق == Parasitic Fauna of Some Fish Species from Diyala River in Diyala Province

Author name: حيدر جاسم محمد
Supervisor name: عبد علي جنزيل جبارة الساعدي
General topic: Biology
Specific topic: Microbiology - Parasites
Degree: Master
Language: English
University location: Baghdad
First pages:

دراسة تاثير مستخلصي ازهار نبات القيصوم داخل وخارج الجسم على الخصوبة في ذكور الفئران == In vivo and in vitro Study on the Effects of Achillea millefolium Flower Extracts on Fertility in Mice Male

Author name: ضفاف يوسف يعقوب بطي
Supervisor name: Khulood Al-Sameraei | Mohammed A. Ibrahim
General topic: Biology
Specific topic: Biotechnologies
Degree: Master
Language: English
University location: Baghdad
First pages:

دراسة التاثيرات السمية لمبيد الادغال كولدتوبيك (80EC (في بعض اعضاء سمكة البعوض Gambusia holbrooki (Girard,1859)

Author name: طيبة نجم حسن
Supervisor name: مها عبد النبي الغريري
General topic: Biology
Specific topic: Environment
Degree: Master
University: University of Baghdad
Language: Arabic
University location: Baghdad
First pages:

تعدد النمط الوراثي للجين GSTT1,GSTM1 في الاطفال العراقيين المصابين بمرض السكري النوع الاول == Genetic Polymorphism of (GSTM1, GSTT1) Gene in A sample of Diabetes Mellitus type1 in Iraqi children

Author name: سهام مجيد محمد
Supervisor name: بتول علي شهاب | رافد علاء جاسم
General topic: Biology
Specific topic: zoology - Genetics
Degree: Master
Language: English
University location: Baghdad
First pages:
Abstract: Type1 diabetes mellitus uncommon problem in Iraq which increase incidence of effected young age groups ,and its regards one of the multifactorial disorders with genetics and environmental factors playing important role in its cause and pathogenesis ,complication, prognosis.In diabetes, the defects in cellular metabolism especially hyperglycemia results in increasing free radicals. These radicals react with other vital cellular molecules which are responsible in diabetes side effects. Human glutathione S - transferees (GST) are a family of enzymes that catalysis conjugation of electrophilic substances with glutathione. In this research the deletion and expression of two of the most important genes of this family; GSTT1 and GSTM1 genes was investigated as the risk factor for type1 DM and control of the disease glycated hemoglobin (HbA1c), body mass index (BMI) as ( indicators of diabetic control), in relationship to the age , gender , age of the onset, duration of the disease, and also study of 10 parents of type1 DM to demonstrate the genetic role of GSTs genes in the disease.Forty four type1 DM patients were enrolled (23M & 21 F) and compared with 42 non diabetic counterparts matching with age and gender as regards as control group.Deletion of GSTM1 and GSTT1 genes was observed in (3) diabetics’ patients as compared with control group 3/44 (6.8%), 0/42 (0%) respectively . Also this percentage was increased, 8/11 (72.73) 1/11 (9.09) in the poor control type1 DM (HbA1c < 10), while in the underweight 5/10 (50%), 6/10 (60%) are Significant Correlation between GSTM1 null / GSTT1 present genotype, also study showed more incidence in the male than female patients.There are increase incidence of the expression and deletion of GST genes with aging, chronicity of disease, glycemic control, family GST gene states , and BMI.The type1 DM had effect on the GST states according to the gender, age , age of onset and duration of the disease .

المستوى المصلي وتعدد الشكل الوراثي لل IL - 10 ، IL - 2 ، IFN - في عينة للاطفال العراقيين المخمجين بالليشمانيا الاحشائية == Serum level and gene polymorphism of IFN - ?, IL - 2, IL - 10 and IL - 12 in a sample of Iraqi children with Visceral Leishmaniasis

Author name: زهراء عبد الرحیم احمد عبد لله
Supervisor name: اخلاص مشرف عیدان | علي حسین ادحیة
General topic: Biology
Specific topic: Microbiology
Degree: Doctorate
Language: English
University location: Baghdad
First pages:
Abstract: Visceral leishmaniasis (VL) is a severe chronic systemic zoonotic disease caused by the protozoan Leishmania donovani or L. infantum, in which cytokines play an important role in its pathogenesis. These cytokines are under genetic controls, and their gene polymorphisms have been suggested to exert a functional role in regulating cytokine gene expression. Therefore, the present study determined IFN - γ, IL - 2, IL - 10 and IL - 12 serum levels and gene polymorphisms of 11 cytokine and cytokine receptor genes (IL1A, IL1B, IL2, IL4, IL4R, IL6, IL10, IL12B, TNF, IFNG and TGFB1) in VL patients by ELISA assay and sequence specific primer - PCR method. Gene polymorphism impact on IFN - γ, IL - 2, IL - 10 and IL - 12 serum levels was also evaluated.Forty - four Iraqi Arabs VL patients (age range : 4 months to 12 years) were enrolled in the study. They were referred to hospitals in two Iraqi governorates (Baghdad and Wasit) during the period March 2013 - February 2014. A control sample of 40 apparently healthy individuals was also included and matched patients for age and ethnicity.Most of the ascertained VL cases were in winter and spring with frequencies of 43.2 and 50.3%, respectively. The results also revealed that the age group 1 - 3 years accounted for more than 50% of cases (54.5%) and the infection was more prevalent in male (65.9%) than females (34.1%).A significant increased serum level of IL - 2 (14.72 ± 1.14 vs.4.43 ± 0.49 pg/ml), IL - 10 (40.02 ± 1.26 vs.18.60 ± 1.82 pg/ml), IFN - γ (29.06 ± 1.05 vs. 12.83 ± 1.38 pg/ml) was recorded in VL patients compared to controls. While, IL - 12 serum level showed a non - significant increased level in patients (5.33 ± 3.26 vs.2.17 ± 0.36 pg/ml). Cytokine gene polymorphism analysis revealed that neither genotypes nor alleles of IL1B - 511, IL4R+1902, IL12B - 1188, IFNG+874, TGFB1+896, TNF - 308, IL2 - 330, IL2+166, IL4 - 590, IL4 - 33, IL6nt565/ - 597, IL6 - 174, IL10 - 1082, IL10 - 819 and IL10 - 592 genes showed a significant variation between VL patients and controls. In contrast, a positive association between IL - 1β+3962 CC genotype an C allele and IL4 - 1098 G allele and VL was observed (susceptible genotypes and alleles), while a negative association (protective genotypes and alleles) was recorded for IL1A - 889 TT genotype, IL1B+3962 T allele and IL4 - 1098 TT genotype and T allele. To determine the impact of cytokine genotypes on cytokines serum level, VL patients and controls were distributed according to their serum level in the three genotypes of each cytokine. It was found that TG genotype of IL2 - 330 was observed with the highest IL - 2 level (16.56 ± 1.69 pg/ml) compared to other genotypes. The GT genotype of IL2+166 also showed the highest level of IL - 2 (17.47 ± 2.34 pg/ml) compared to GG (13.53 ± 1.38pg/ml) or TT (15.77 ± 3.88 pg/ml) genotypes in patients. The IL10 - 1082 GG genotype showed the highest level of IL - 10 in patients (45.73 ±3.15 pg/ml) compared to AA (38.02 ± 1.48 pg/ml) genotype. For IL10 - 819 genotypes, they recorded approximated means in patients and no significant difference between them was observed. At the third position of IL10 gene (IL10 - 592), neither patients nor controls demonstrated a significant difference between the means of IL - 10 in their genotypes. At IL12 - 1188, CC genotype showed a significant increase level of IL - 12 (26.16 ±19.76 pg/ml) compared to CA and AA genotype(1.35 ± 0.35 pg/ml and 1.48 ± 0.23 pg/ml respectively) in patients. Finally, neither VL patients nor controls demonstrated a significant difference between the means of IFN - γ in the genotypes of IFNG+874. In conclusion, the role of cytokines in pathogenesis of VL wasascertained, but such role can be better understood in the ground of cytokine gene polymorphisms, which may also have susceptibility or protective effects.

توصيف جزيئي للخلايا الجذعية المتحفزة لتكوين خلايا عصبية == Molecular Characterization of Stem Cells that Induce Neurogenesis

Author name: مائده حسين محمد
Supervisor name: ناهي يوسف ياسين
General topic: Biology
Specific topic: Animal - Molecular Biology
Degree: Doctorate
Language: English
University location: Baghdad
First pages:
Abstract: The in vitro isolation, identification, differentiation, and neurogenesis characterization (with molecular studies by conventional and real time - PCR) of stem cells source were investigated to produce two type of stem cells. This two types including neural cells and neural stem cells in culture which use it as a successful sources for further treatments. And finally chosen the best medium formula for maintenance the produced neural stem cells, also to prove their stemness state in culture. The mouse bone marrow mesenchymal stem cells was used as the source of stem cells in this study. Two type of neural differentiation formula was used to induced neural cells and then neural stem cells. The first formula was butylated hydroxyanisole, and the second formula was β - mercaptoethanol reagents. Also three type of different neural stages markers were used; nestin as immaturation stage marker, neurofilament light - chain as early neural marker, and microtubule association protein as maturation marker. These markers were represented the different neurogenesis stages started from mesenchymal stem cells (as undifferentiated cells), neural stem cells production stages, and towards neuron cells (as differentiated cells).The results of immunocytochemistry and real time - PCR of butylated hydroxyanisole differentiation method showed that in contrast to mesenchymal stem cells (as control group), neural differentiated cells showed neural progenitor pattern, by showing stable increased in nestin gene expression significantly through differentiation process for different exposure time, with increased of protein expression significantly compared with control. While, neurofilament light - chain gene and protein expression started to increase significantly, but not - IIreplacedthe nestin expression completely even when its expression passed nestin levels compared with control group. In contrast to the maturation marker microtubule association protein which showed a very low expression during the duration of differentiation period in protein and gene expression (with significant effect) compared with control. This results proved that the cells were still progenitors and do not passed the maturation stage, therefore there was a difficult to define the exactly time of neural stem cells production stage from this formula and as a good formula to produce neuron cells in culture. In other side, the results of immunocytochemistry and real time - PCR of β - mercaptoethanol (as another differentiation formula) were showed that this formula was successful to produce both neural stem cells as well as neuron cells from this formula. This occur through increasing and over expressing of nestin protein and gene significantly within the early hours exposure time reaching to the highest expression levels. Compared with decreased and lower expressed in neurofilament light - chain protein and gene expression levels compared with control; therefore from this stage (exposure time) we can produce neural stem cells in culture. And then decreased and lower expressed of both protein and gene expression of nestin significantly compared with increasing the expression of neurofilament light - chain protein and gene levels throw the late exposure times compared with control, this results indicated that this stage was starting of maturation stage toward neuron cells. Also the proving of this results was lower expression levels of almost all exposure times of microtubule association protein for their protein and gene (with significant effect).The results of gene expression analysis of using four different media formulas to proved the stemness state and maintained the neural stem cells in culture showed that 6 h exposure to β - mercaptoethanol was enough to create - IIIneuralstem cells which maintained using MEM media with 5% FBS, with b - FGF, or with b - FGF &EGF. This study confirms that the molecular characterization study of stem cells in culture will assist to studying and clarifying the neurogenesis pathway through neural differentiation process, by clarified the mechanisms of neural genes through the in vitro differentiation of stem cells, and therefore ability to produced both neuron cells and neural stem cells by using the molecular studies.

التراكم الحيوي للهيدروكربونات في الكتلة الحية لبعض بطنية القدم الارضية والمائية في مدينة بغداد == Bioaccumulation of Hydrocarbons in the Biomass of Some Terrestrial and Aquatic Gastropods in Baghdad City

Author name: زهراء احمد شاكر
Supervisor name: عماد الدين عبد الهادي المختار
General topic: Biology
Specific topic: Environment
Degree: Master
Language: English
University location: Baghdad
First pages:
Abstract: In the present study, the concentrations of total petroleum hydrocarbons (TPHs) in tissues and shells of the aquatic and terrestrial gastropods (Melanopsis nodosa and Monacha cantiana) were evaluated.Samples were collected from six sites within Baghdad city which was divided into two sectors, a northern sector and a southern sector whereas each was represented by sampling sites of aquatic and terrestrial habitats to best represent the area affected by hydrocarbon residues.Samples of sediments, soils and snails (collected once every two months for the period from November 2014 to May 2015) were analyzed by using Gas Chromatography (GC). The levels of TPHs ranged between (0.14 - 2.58) μg/g in sediments and soils, between (0.21 - 3.48) μg/g in snail tissues and between (0.10 - 2.65) μg/g in snail shells.The concentrations of TPHs in the biomass of aquatic and terrestrial snails showed significant seasonal variations and strongly dependent on the amount of TPHs in the surrounding media. The concentrations of TPHs in snail biomass were below the permissible limit recommended by world health organization (WHO).The physical and chemical properties of the river water and soil recorded several values ranged between 12.4 - 24.4ºC, 10.0 - 23.7ºC, 705.0 - 1016.0 μs/cm, 344.0 - 1050.0 μs/cm, 7.2 - 8.2, 8.3 - 8.8, 81.3 - 164.0 mg/L, 125.0 - 188.0mg/L, 7.1 - 10.2 mg/L, 2.2 - 5.3 mg/L, 16.53 - 25.42% and 1.46 - 2.84% for water temperature, soil temperature, electrical conductivity of water, electrical conductivity of soil, hydrogen ion concentration in water, hydrogen ion concentration in soil, calcium ion concentration in water, calcium ion concentration in soil, dissolved oxygen, biological oxygen demand, soil moisture and soil organic matter respectively in study area.The study showed a significant positive correlation between TPHs concentration in snail biomass and hydrogen ion concentration in water, electrical conductivity of soil, soil moisture and soil organic matter. Besides, a significant negative correlation was detected between TPHs concentration in snail biomass and water and soil temperature and calcium ion concentration in water and soil.

امكانية تحفيز بعض الطحالب المعزولة محليا لانتاج الوقود الحيوي == Possibility of stimulation of some locally isolated algae for production of biofeul

Author name: ثائر محمد ابراهيم العكيلي
Supervisor name: ابراهيم مهدي عزوز السلمان
General topic: Biology
Specific topic: plant - aquatic life
Degree: Doctorate
University: University of Baghdad
Language: Arabic
University location: Baghdad
First pages:
Abstract: In the current study, samples of algae have been collecting from( Springs , Streams and Rivulets)including in northern of Iraq (the area on the Iraqi - Iranian and Turkish borders, and from the middle in the areas of (Tarmiya and Alabegi) several races of used algae in biofuels such as : Scendesmus spp , S . quadricouda , S . Dimorphus,Chroococcus sp. ,Chlorococcum humicola , Microcystsp. , Asterococcus sp. ,Chlorella sp , Oscillotoriasp. , Anabena sp , Nostoc. sp. , Ankistrodesmus falcatus.diagnosed , were isolated and prepared pure cultures of Asterococcus sp. , S dimorphus, C.humicola and were selected three culture medium (BG11, Chu13, Chu10)for culturing and development of these algae under controlling conditions (2 ± 25 ° C, intensity of illumination 3000 Lux and 8 : 16 light : darkness system).Experiments include three axes, the first representing the study of the influence of media - type and installed in curves and growth rates (K) and doubling time(G) and estimate the biomass of the tested algae, in addition to monitoring the effectiveness of the quality of the medium in the chemical content of algae and of (total of lipids, proteins, carbohydrates content and fatty acids). A second include the treatment are (remove nitrogen from the media, addition NaCl with 2 g.l - 1, addition of vitamins mixture (B1, B6, B12) in the following concentrations (0. 1, 0.1, 0. 01) mg .l - 1, respectively and change the current speed (as a mixing factor) of 400 and 850 l. h - 1). Third axis include the efficiency of the Photobioreactor system test (Tubular Photobioreactor named( I.TH.1) designed by a researchers for the purpose of comparison between culturing in bottles and the possibility of the application of expandingproduction in the reactor system of 120 liters, for testing C. humicola in Chu13media.The results showed that the highest growth rate recorded in BG11 for Asterococcus sp, was 0.343 cells . day - 1 depending on the absorbance values at of 650 nm wavelength, while the highest rate depending on the number of cells scored in Chu13 after the addition of vitamins mixture for C.humicola was 1.16 cells .day - 1, while the lowest growth rate(K) scored in Asterococcus sp, In Chu10 after the removal of nitrogen and reached 0.04 cells . day - 1, as less doubled time(G) scored when Chu13 after the addition of NaCl to Asterococcus sp, and reached 1.12 day depending on the absorbance values, while less doubling time(G) was relying on the number of cells in C.humicola in Chu13 after the addition of vitamins and amounted to 0.257day.The highest doubled time(G)13.7 and 15.05 day was scored in BG11 after removing N2 form culture medium of Asterococcus sp, depending on the absorbance values and the number of cells respectively. The highest biomass value recorded at Asterococcus sp with current speed 400 l.h - 1 and amounted to 0.724 mg .g - 1 dry weight,while the less biomass0.203 mg.g - 1 dry weight at the same algal after the addition of NaCl to Chu10 .The highest value of total lipids recorded at removing nitrogen from the Chu13 inS.dimorphus amounted 320.8 mg . g - 1 (dry weight) while it was less than at the C.humicola in control. As Chu10 recorded the highest percentage of total lipids was registered at S.dimorphus in BG11 after removing nitrogen and stood at 81.48%. The lowest percentage was registered with C.humicola in Chu10 amounted to 32.49%.The highest amount of total proteins , when Asterococcus sp developed at current speed of 400 l . h - 1 in Chu13 amounted to 299.7 mg . g - 1 (dry weight), while the least value was registered at S.dimorphus amounted to 8.9 mg . g - 1 in BG11 - free of nitrogen. While recorded the highest percentage of total proteins when Asterococcus sp, after the addition of NaCl to BG11media and amounted to 51.17%, while the lowest percentage was registered to the same alga after removing nitrogen from the BG11 and amounted to 5.7%.Results prepared that the highest amount of total carbohydrates, was recorded in the S.dimorphus when the velocity of 400 l . h - 1 and amounted to 63.09 mg . g - 1 (dry weight), and the least amount was registered in Asterococcus sp in Chu10 after the addition of vitamins. While the highest percentage recorded for carbohydrates in S.dimorphus in control BG11 reached 41.67%,and the lowest percentage was in Asterococcus sp at Chu10 after the addition of a mixture of vitamins and stood at 4.65% .When the follow - up impact of the transactions used in the experiments in quality and quantity of fatty acid (Luric, Palmetic, Stearic, Lionoleic, α - liolenic, Oleic, Archidic, DHA), we find that the the final concentrations have varied significantly, recorded acids Luric, Palmetic, Stearic higher concentrations when Asterococcus sp. In Chu13 after the addition of NaCl first and, second and was 46.7, 381.27 mg . l - 1, respectively, while the acid Stearic amounted to 117.0 mg . l - 1 after removing nitrogen from BG11. While α - linoleic, Linoleic asid recorded the highest amount it reached 188.3, 22.7mg.l - 1 when Chu10 after the addition of vitamins and at the speed of 400 l . h - 1, respectively, for Asterococcus sp, As Oleic, Archidic, DHA acids recorded the highest amount in C.humicola amounted to 125.08, 131.8,175.65 mg .l - 1 , at the current speed of 400 l . h - 1 in the first and second acides, when BG11 after removing nitrogen, DHA acid,as in terms of percentages acids, we find that the current study showed the highest percentage of Linoleic, Luric amounted to 39.69, 84.9% at the control Chu10 and Chu13 after treatment with vitamins respectively in Asterococcus sp.While DHA Oleic, α - linoleic, Stearic acids recorded highest percentage reached to 43.39, 44.25, 46.71, 46.85%, respectively, in S.dimorphus in BG11control , after treatment with vitamins to Chu10and after the addition NaCl toBG11respectively . As Archidic, Palmetic acids recorded the highest percentage in C.humicola amounted to 28.42, 62.6%, respectively, in BG11control and the speed 850 l . h - 1.the highest amount of saturated fatty acids S.F.A recorded in Asterococcus sp. and it amounted to 951.7 mg . l - 1 after the addition NaCl to Chu13 .The highest percentage was registered at the same alga 92.5% in Chu13control. Current studie also recorded the highest amount of unsaturated fatty acid U.F.A recorded in Asterococcus sp. and it amounted to 488.2 mg .l - 1 when adding vitamins to Chu10, while the highest percentage recorded in S.dimorphus amounted to 91.79% when adding NaCl to BG11.I n applying the experience of the test reactor, the photobioreactor of 120 liters and choosing alga C.humicola inChu13 and 400 l .h - 1, we find that the system I.TH.1 has given the results and the differences were not significant in terms of impact on growth rates and the doubling time of replication when compared with the first and second controls(Chu13 represent first control sized 150 ml and the process to shake once a day and the second control mixing factor 400 l . h - 1 in 3 - liter size). In terms of the impact of I.TH.1 on the biomass it has increased significantly when the first control while non - significant differences were recorded for the second control at the level of probability (P≤ 0.05) either when the effect in the chemical content of the total of studied alga, we find it recorded 199.6, 200.5, 198.2 mg . g - 1 of total lipids and 218.5, 214.3, 185.9 mg . g - 1 of total proteins and 147.7, 165.1, 143.2 mg . g - 1 of total carbohydrates in the first , second control, I.TH.1respectively. These results show no significant differences between the results of I.TH.1 and education in bottles laboratory. either at the level of the quantity and quality of fatty acids, we find that there is variation in the results as recorded all the fatty acid was significantly higher for the first control except Luric acid which disappeared from the second control and I.TH.1 , while there was a significant decrease in α - Liolenic, Olice, Archidic acids. While I.TH.I recorded an increase in Palmetic, Linolic, DHA acids compared with the second control, with the advent of acidic Myrestic and Stiric in the system and the disappearance in two controls, That shows the importance of the use of these bioreactors in the biofuel production studys.

تعدد الاشكال للنيوكليوتيدة المفردة لبعض الحركيات الخلوية في مرض المعي الالتهابي لدى مرضى عراقيين == Single Nucleotide Polymorphisms of some Cytokines in Inflammatory Bowel Disease of Iraqi Patients

Author name: ابتسام بداي حسان الكناني
Supervisor name: بتول علي شهاب | علي حسين ادحية
General topic: Biology
Specific topic: zoology - Genetics
Degree: Doctorate
Language: English
University location: Baghdad
First pages:
Abstract: Inflammatory bowel disease (IBD) is a world healthcare problem that involves two major forms : Crohn’s disease (CD) and ulcerative colitis (UC). Immunogenetic predisposition is one of the risk factors for the disease, and cytokines are among these factors. Therefore, the association between 13 SNPs (single nucleotide polymorphisms) of cytokine and cytokine receptor genes (IL1A, IL1B, IL1R1, IL1RN, IL2, IL4, IL4R, IL6, IL10, IL12B, IFNG, TNF and TGFB1) and IBD was determined in samples of Iraqi Arab patients (34 CD and 66 UC). The patients were referred to the Gastrointestinal Tract Unit at Al - Kindy Teaching Hospital, Al - Yarmouk Teaching Hospital and Al - Zuafrania General Hospital in Baghdad for diagnosis and treatment during the period August 2013 - October 2014. A control sample of 43 individuals was also included.The following results were reached by the study : 1. Interleukin - 1 alpha gene (IL1A - 889) : frequencies of CC genotype and C allele were significantly increased in CD (58.8 and 73.5%, respectively) and UC (54.6 and 71.2%, respectively) patients compared to controls (25.5 and 40.7%, respectively). In contrast, TT genotype and T allele frequencies were significantly decreased in CD (11.8 and 26.5%, respectively) and UC (12.1 and 28.8%, respectively) patients compared to controls (44.2 and 59.3%, respectively).2. Interleukin - 1 beta gene (IL1B - 511) : Frequency of TC genotype was significantly increased in UC patients compared to controls (63.6 vs. 39.5%; P = 0.018), while CC genotype frequency was decreased (6.1 vs. 32.2%; P = 0.061). No variation was observed in CD patients.3. Interleukin 1 receptor type 1 gene (IL1R1pstl 1970) : Frequencies of TT genotype and T allele (47.1 and 67.7%, respectively) were significantly increased (P = 0.026 and 8.6*10 - 5, respectively) in CD patients compared to controls (20.9 and 34.97%, respectively). In contrast, CC genotype (11.8 vs. 51.2%) and allele C (32.4 vs. 65.1%) frequencies were significantly decreased (P = 2.8*10 - 4 and 8.6*10 - 5, respectively) in CD patients. For UC, the patients demonstratedgnificant increased frequencies of TC genotype (48.5 vs. 27.9%; P = 0.045) and T allele (63.6 vs. 34.9%; P = 5.1*10 - 5) compared to controls. As in CD, UC patients also demonstrated significant decreased frequencies of CC genotype (12.1 vs. 51.2%; P = 1.7*10 - 5) and C allele (36.4 vs. 65.1%; P = 8.6*10 - 5).4. Interleukin 2 gene (IL2+166) : Among CD patients, frequencies of TT genotype (41.2 vs. 6.9%) and T allele (64.7 vs. 43.0%) were significantly increased in patients compared to controls (P = 0.001 and 0.009, respectively). In contrast, TG genotype (47.1 vs. 72.1%; P = 0.035) and G allele (35.3 vs. 56.9%; P = 0.009) frequencies were significantly decreased. Almost, similar observations were made in UC patients.5. Interleukin 4 gene (IL4 - 590) : it was observed that frequencies of TT genotype (52.9 vs. 11.6%; P = 1.2*10 - 4) and T allele (70.6 vs. 24.4%; P = 1.6*10 - 8) were significantly increased in CD patients compared to controls. In contrast, CC genotype (11.8 vs. 62.8%, P = 5.6*10 - 6) and C allele (29.4 vs. 75.6%; P = 1.6*10 - 8) frequencies were significantly decreased. In the case of UC, frequencies of TC genotype (69.7 vs. 25.6%; P = 1.1*10 - 5) and T allele (62.1 vs. 24.4%; P = 4.6*10 - 8) were significantly increased in patients, while CC genotype (3.0 vs. 62.8%; P = 2.5*10 - 12) and C allele (37.9 vs. 75.6%; P = 1.6*10 - 8) frequencies were significantly decreased in patients.6. Interleukin 4 receptor gene (IL4R+1902) : frequencies of GG genotype (47.1 vs.11.6%) and G allele (55.9 vs. 37.2%) were significantly increased in CD patients compared to controls (P = 0.001 and 0.023, respectively). In contrast, GA genotype (17.7 vs. 51.1%; P = 0.004) and A allele (44.1 vs. 62.8%; P = 0.023) frequencies were significantly decreased. In UC patients, frequencies of GG genotype (57.6 vs. 11.6%) and G allele (75.8 vs. 37.2%) were significantly increased (P = 1.0*10 - 6 and 1.9*10 - 8, respectively); while frequencies of AA genotype (6.1 vs. 37.2%; P = 7.0*10 - 5) and A allele (24.2 vs. 62.8%; P = 1.9*10 - 8) were significantly decreased.7. Interleukin 6 gene (IL6+565) : Comparing patients to controls revealed that GG genotype frequency was significantly increased in CD (70.6 vs. 13.9%; P = 1.5*10 - 8) and UC (69.7 vs. 13.9%; P = 4.4*10 - 7) patients, and a similar increased frequency of G allele was observed. In contrast, the GC genotype frequency was significantly decreased in CD (23.5 vs. 76.7%; P = 3.7*10 - 6) and UC (24.2 vs. 76.7%; P = 7.0*10 - 6) patients.8. Interleukin 12B gene (IL12B - 1188) : Frequency of A allele was significantly increased in CD patients compared to controls (67.7 vs. 47.7%; P = 0.015), while C allele was significantly decreased (32.4 vs. 52.3%; P = 0.015). For UC, the heterozygous genotype AC showed a significant increased frequency in patients compared to controls (66.7 vs. 30.2%; P = 3.6*10 - 4), while CC genotype frequency was significantly decreased (6.1 vs. 37.2%; P = 7.0*10 - 5). 9. Interferon gamma gene (IFNG+874) : The AT genotype showed a significant increased frequency in CD patients compared to controls (58.8 vs. 30.2; P = 0.020), while TT genotype frequency was significantly decreased (11.8 vs.39.5%; P = 0.009). For UC, AA genotype (54.6 vs. 30.2%; P = 0.018) and A allele (74.2 vs. 45.4; P = 2.7*10 - 5) frequencies were significantly increased in patients. In contrast, TT genotype (6.1 vs. 39.5%; P = 2.8*10 - 5) and T allele (25.8 vs. 54.7%; P = 2.7*10 - 5) frequencies were significantly decreased. 10. Tumor necrosis factor alpha gene (TNF - 308) : Comparing CD patients to controls revealed no significant variation, while UC patients demonstrated a significantly (P = 0.006) increased frequency of G allele (71.2 vs. 52.3%) and a decreased frequency of A allele (28.8 vs. 47.7%). 11. Interleukin 1 receptor antagonist (IL1RNmaspl 11100), interleukin 10 gene (IL10 - 1082) and Transforming growth factor beta (TGFB1codon 25) genes : Comparing patients to controls revealed no significant variations in genotype or allele frequencies.The presented results of the 13 cytokine SNPs in CD and UC patients are the first report in Iraqi patients, and their findings highlighted the role of these SNPs in etiopathogenesis of both groups of IBD, and paved the way for further investigations to determine the role cytokine gene polymorphisms in susceptibility to IBD or their protective effects.
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